http://exaviz.simlab.ibpc.fr/index.php 2016-01-21T14:01:45+00:00 Joomla! - Open Source Content Management 2014-09-29T15:58:57+00:00 2014-09-29T15:58:57+00:00 http://exaviz.simlab.ibpc.fr/index.php/42-vitaminsr Marc Baaden baaden@smplinux.de

<div class="feed-description"><p>ExaViz project members are proud to announce the release of <em><strong>Vitamins</strong></em> (<span style="text-decoration: underline;"><strong>V</strong></span>isual and <span style="text-decoration: underline;"><strong>I</strong></span>n Si<span style="text-decoration: underline;"><strong>t</strong></span>u <span style="text-decoration: underline;"><strong>A</strong></span>nalytics for <span style="text-decoration: underline;"><strong>M</strong></span>olecular <span style="text-decoration: underline;"><strong>In</strong></span>teractive <span style="text-decoration: underline;"><strong>S</strong></span>imulation), an open source framework for the analysis and visualisation of large molecular dynamics trajectories directly acquired in-situ while the simulation is running, or read from files. The main Vitamins repository is at <a href="http://vitamins.gforge.inria.fr" target="_blank" title="Vitamins main repository site">http://vitamins.gforge.inria.fr</a>.</p> <p>Vitamins currently supports Gromacs and MdAnalysis and runs on Linux and Mac OS X. Vitamins is meant to be a flexible and high performance framework that users can customize to support their preferred tools and own analytics scenarios. Vitamins has been used for large simulation running on several thousands cores.</p> <p><a href="http://vitamins.gforge.inria.fr" target="_blank" title="Vitamins website" style="line-height: 1.3em;"><img src="images/vitamins5.png" border="0" alt="" title="Vitamins logo" width="30%" height="30%" /></a></p></div>

<div class="feed-description"><p>ExaViz project members are proud to announce the release of <em><strong>Vitamins</strong></em> (<span style="text-decoration: underline;"><strong>V</strong></span>isual and <span style="text-decoration: underline;"><strong>I</strong></span>n Si<span style="text-decoration: underline;"><strong>t</strong></span>u <span style="text-decoration: underline;"><strong>A</strong></span>nalytics for <span style="text-decoration: underline;"><strong>M</strong></span>olecular <span style="text-decoration: underline;"><strong>In</strong></span>teractive <span style="text-decoration: underline;"><strong>S</strong></span>imulation), an open source framework for the analysis and visualisation of large molecular dynamics trajectories directly acquired in-situ while the simulation is running, or read from files. The main Vitamins repository is at <a href="http://vitamins.gforge.inria.fr" target="_blank" title="Vitamins main repository site">http://vitamins.gforge.inria.fr</a>.</p> <p>Vitamins currently supports Gromacs and MdAnalysis and runs on Linux and Mac OS X. Vitamins is meant to be a flexible and high performance framework that users can customize to support their preferred tools and own analytics scenarios. Vitamins has been used for large simulation running on several thousands cores.</p> <p><a href="http://vitamins.gforge.inria.fr" target="_blank" title="Vitamins website" style="line-height: 1.3em;"><img src="images/vitamins5.png" border="0" alt="" title="Vitamins logo" width="30%" height="30%" /></a></p></div> 2014-09-23T18:04:21+00:00 2014-09-23T18:04:21+00:00 http://exaviz.simlab.ibpc.fr/index.php/43-exaviz-paper-published-at-fd169 Marc Baaden baaden@smplinux.de

<div class="feed-description"><p>The ExaViz project made significant progress by summarizing all the recent work in the following article:</p> <p><a href="http://dx.doi.org/10.1039/C3FD00142C" target="_self" title="Website for the article">M. Dreher, J. Prevoteau-Jonquet, M. Trellet, M. Piuzzi, M. Baaden*, B.  Raffin*, N. Férey, S. Robert, S. Limet: <span style="line-height: 1.3em;">"FD169: Exaviz: A Flexible Framework to Analyse, Steer and Interact with Molecular Dynamics </span><span style="line-height: 1.3em;">Simulations", Faraday Discuss., 2014, Accepted Manuscript, doi: 10.1039/C3FD00142C</span></a></p> <p><span style="line-height: 1.3em;">It is accompanied by the release of the Vitamins framework (see other news ticket).</span></p></div>

<div class="feed-description"><p>The ExaViz project made significant progress by summarizing all the recent work in the following article:</p> <p><a href="http://dx.doi.org/10.1039/C3FD00142C" target="_self" title="Website for the article">M. Dreher, J. Prevoteau-Jonquet, M. Trellet, M. Piuzzi, M. Baaden*, B.  Raffin*, N. Férey, S. Robert, S. Limet: <span style="line-height: 1.3em;">"FD169: Exaviz: A Flexible Framework to Analyse, Steer and Interact with Molecular Dynamics </span><span style="line-height: 1.3em;">Simulations", Faraday Discuss., 2014, Accepted Manuscript, doi: 10.1039/C3FD00142C</span></a></p> <p><span style="line-height: 1.3em;">It is accompanied by the release of the Vitamins framework (see other news ticket).</span></p></div> 2012-02-11T23:11:40+00:00 2012-02-11T23:11:40+00:00 http://exaviz.simlab.ibpc.fr/index.php/19-vizbi-2012-conference-coming-up-soon Marc Baaden baaden@smplinux.de

<div class="feed-description"><p>Next month in Heidelberg visualizing biological data will be a major topic at the 3rd VizBi conference: <a href="http://vizbi.org/2012/" target="_blank">http://vizbi.org/2012/</a></p></div>

<div class="feed-description"><p>Next month in Heidelberg visualizing biological data will be a major topic at the 3rd VizBi conference: <a href="http://vizbi.org/2012/" target="_blank">http://vizbi.org/2012/</a></p></div> 2013-02-09T00:00:00+00:00 2013-02-09T00:00:00+00:00 http://exaviz.simlab.ibpc.fr/index.php/14-test MB baaden@smplinux.de

<div class="feed-description"><p><img src="images/icons/response_b2b.gif" border="0" align="left" />Two new job openings in the ExaViz project are available at IBPC. There is a a <a href="images/documents/pdoc_viz.pdf" target="_blank">post-doctoral or engineer position</a> and a <a href="images/documents/phd_biospring.pdf" target="_blank">doctoral position</a> to be filled, do not hesitate to contact us! Check out the details on the <a href="index.php/jobs">JOBS menu</a> page.</p></div>

<div class="feed-description"><p><img src="images/icons/response_b2b.gif" border="0" align="left" />Two new job openings in the ExaViz project are available at IBPC. There is a a <a href="images/documents/pdoc_viz.pdf" target="_blank">post-doctoral or engineer position</a> and a <a href="images/documents/phd_biospring.pdf" target="_blank">doctoral position</a> to be filled, do not hesitate to contact us! Check out the details on the <a href="index.php/jobs">JOBS menu</a> page.</p></div>